[ Python ] I need help building 6 gene trees -- 2

Dokončeno Zveřejněno před 8 měsíci K zaplacení v momentě doručení
Dokončeno K zaplacení v momentě doručení

I need help building 6 gene trees.

I need 6 clean, clear, phylogenetic trees built for all 6 genes. The phylogenetic relationship in the end trees should be clear and make sense. For each tree, I need notes about the tree production like removal of specific sequences, branches, alignments, trimming etc. so the data is reproducible.

- here is a zip of sequences for the genes (.pep for peptide and .cds for coding file)

some sequences are longer than others

I aligned the files with MAFT.

If you need to realign or trim files, that's alright.

They just need to have the stop codons (aka. the full protein)

- RAxML (Randomized Axelerated Maximum Likelihood) is a popular program for phylogenetic analysis of large datasets under maximum likelihood. Its major strength is a fast maximum likelihood tree search algorithm that returns trees with good likelihood scores.

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- I use Linux and biopython interchangeably

Thank you.

Programování v C Java Python Softwarová architektura Machine Learning (ML)

Identifikační číslo projektu: #37133232

O projektu

5 nabídek Projekt na dálku Aktivní před 8 měsíci

Uděleno uživateli:

ImraanTech

Hey man Certainly, I'd be happy to help you build the phylogenetic trees for the 6 genes using the provided sequences and RAxML. Ping me Thanks I can make the rest for you

$60 USD za 1 den
(6 recenzí)
3.7

5 Freelnceři na tento projekt zveřejňují nabídky v průměru $54

sonus21

Hello! I hope you're well. I'm a seasoned Python developer based in India with over 10+ of experience, specializing in python. I've delivered more than 100 projects over time with 5* rating. ➢ Python: Pandas, Numpy, Další

$30 USD za 7 dní
(66 Recenzí)
6.3
MubashirAs62

Hello, I have read the requirements I am full stack MERN developer, I can work on Python as well. please start the chat and let's discuss this project more in detail. Thank you.

$100 USD za 2 dní
(15 Recenzí)
4.8
bhuvanabkp123

I understand that you are looking for help building 6 gene trees and I believe I am the perfect fit for this project. With my experience in data entry , typing , Microsoft word, Matlab, labVIEW, C programming and Pytho Další

$30 USD za 7 dní
(2 Recenzí)
3.0
solomiiahuliak

⭐⭐⭐Hello Ciro I. Good afternoon!⭐⭐⭐ I am excited to submit my proposal for the "[ Python ] I need help building 6 gene trees -- 2" position. I have developed a strong set of skills that make me confident in my ability Další

$50 USD za 5 dní
(0 Recenzí)
0.0